Human mtDNAAbout

References

Code Authors Title Journal
Abu-Amero 2007 Abu-Amero KK, Gonzalez AM, Larruga JM, Bosley TM, Cabrera VM. Eurasian and African mitochondrial DNA influences in the Saudi Arabian population. BMC Evol Biol 7:32. 2007
Achilli 2004 Achilli A, Rengo C, Magri C, Battaglia V, Olivieri A, Scozzari R, Cruciani F, Zeviani M, Briem E, Carelli V, Moral P, Dugoujon JM, Roostalu U, Loogvali EL, Kivisild T, Bandelt HJ, Richards M, Villems R, Santachiara-Benerecetti AS, Semino O, Torroni A. The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool. Am J Hum Genet 75(5):910-918. 2004
Achilli 2005 Achilli A, Rengo C, Battaglia V, Pala M, Olivieri A, Fornarino S, Magri C, Scozzari R, Babudri N, Santachiara-Benerecetti AS, Bandelt HJ, Semino O, Torroni A. Saami and Berbers - an unexpected mitochondrial DNA link. Am J Hum Genet 76(5):883-886. 2005
Achilli 2008 Achilli A, Perego UA, Bravi CM, Coble MD, Kong QP, Woodward SR, Salas A, Torroni A, Bandelt HJ. The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies. PLoS ONE 3(3), E1764. 2008
Achilli 2011 Achilli,A., Olivieri,A., Pala,M., Hooshiar Kashani,B., Carossa,V., Perego,U.A., Gandini,F., Santoro,A., Battaglia,V., Grugni,V., Lancioni,H., Sirolla,C., Bonfigli,A.R., Cormio,A., Boemi,M., Testa,I., Semino,O., Ceriello,A., Spazzafumo,L., Gadaleta,M.N., Marra,M., Testa,R., Franceschi,C. and Torroni,A. Mitochondrial DNA backgrounds might modulate diabetes complications rather than T2DM as a whole PLoS ONE 6 (6), E21029 (2011)
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Al-Zahery 2011 Nadia Al-Zahery, Maria Pala, Vincenza Battaglia, Viola Grugni, Mohammed A Hamod, Baharak H Kashani, Anna Olivieri, Antonio Torroni, Augusta S Santachiara-Benerecetti and Ornella Semino In search of the genetic footprints of Sumerians: a survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq BMC Evolutionary Biology 2011, 11:288
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Bandelt 2005 Bandelt HJ, Achilli A, Kong QP, Salas A, Lutz-Bonengel S, Sun C, Zhang YP, Torroni A, Yao YG. Low 'penetrance' of phylogenetic knowledge in mitochondrial disease studies. Biochem Biophys Res Commun. 2005 Jul 22;333(1):122-30.
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Barik 2008 Barik SS, Sahani R, Prasad BV, Endicott P, Metspalu M, Sarkar BN, Bhattacharya S, Annapoorna PC, Sreenath J, Sun D, Sanchez JJ, Ho SY, Chandrasekar A, Rao VR. Detailed mtDNA genotypes permit a reassessment of the settlement and population structure of the Andaman Islands. Am J Phys Anthropol 136(1):19-27. 2008
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Bedford 2011 Bedford,F.L. Sephardic signature in haplogroup T mitochondrial DNA. Eur J Hum Genet. (2011), 1–8
Behar 2006 Behar DM, Metspalu E, Kivisild T, Achilli A, Hadid Y, Tzur S, Pereira L, Amorim A, Quintana-Murci L, Majamaa K, Herrnstadt C, Howell N, Balanovsky O, Kutuev I, Pshenichnov A, Gurwitz D, Bonne-Tamir B, Torroni A, Villems R, Skorecki K. The matrilineal ancestry of Ashkenazi Jewry: portrait of a recent founder event. Am J Hum Genet 78(3):487-497. 2006
Behar 2008 Genographic Project Public Participation Database
Behar 2008a Behar DM, Metspalu E, Kivisild T, Rosset S, Tzur S, Hadid Y, Yudkovsky G, Rosengarten D, Pereira L, Amorim A. Counting the founders: the matrilineal genetic ancestry of the Jewish Diaspora. PLoS ONE 3(4): e2062. 2008
Behar 2008b Behar DM, Villems R, Soodyall H, Blue-Smith J, Pereira L, Metspalu E, Scozzari R, Makkan H, Tzur S, Comas D, Bertranpetit J, Quintana-Murci L, Tyler-Smith C, Wells RS, Rosset S; Genographic Consortium. The dawn of human matrilineal diversity. Am J Hum Genet 82(5):1130-1140. 2008
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Bilal 2008 Bilal,E., Rabadan,R., Alexe,G., Fuku,F., Ueno,H., Nishigaki,Y., Fujita,Y., Arai,Y., Hirose,N., Ruckenstein,A., Bganot,G. and Tanaka,M. Mitochondrial DNA haplogroup D4a is a marker for extreme longevity in Japan. NCBI.
Cardoso 2009 Cardoso,S., Alfonso-Sanchez,M.A., Valverde,L., Gonzalez-Andrade,F., Martinez-Jarreta,B. and de Pancorbo,M.M. The Last Human Isolate of the Ecuadorian Amazon: the Waorani and the Mitochondrial Genome Perspective. NCBI.
Carelli 2006 Carelli V, Achilli A, Valentino ML, Rengo C, Semino O, Pala M, Olivieri A, Mattiazzi M, Pallotti F, Carrara F, Zeviani M, Leuzzi V, Carducci C, Valle G, Simionati B, Mendieta L, Salomao S, Belfort R Jr, Sadun AA, Torroni A. Haplogroup effects and recombination of mitochondrial DNA: novel clues from the analysis of Leber hereditary optic neuropathy pedigrees. Am J Hum Genet 78(4):564-574. 2006
Catelli 2011 Catelli,M.L., Alvarez-Iglesias,V., Gomez-Carballa,A., Mosquera-Miguel,A., Romanini,C., Borosky,A., Amigo,J., Carracedo,A., Vullo,C. and Salas,A. The impact of modern migrations on present-day multi-ethnic Argentina as recorded on the mitochondrial DNA genome. BMC Genet. 12, 77 (2011)
Cerny 2009 Cerny V, Fernandes V, Costa MD, Hajek M, Mulligan CJ, Pereira L. Migration of Chadic speaking pastoralists within Africa based on population structure of Chad Basin and phylogeography of mitochondrial L3f haplogroup. BMC Evol Biol 9:63. 2009
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Chaubey 2008 Chaubey G, Karmin M, Metspalu E, Metspalu M, Selvi-Rani D, Singh VK, Parik J, Solnik A, Naidu BP, Kumar A, Adarsh N, Mallick CB, Trivedi B, Prakash S, Reddy R, Shukla P, Bhagat S, Verma S, Vasnik S, Khan I, Barwa A, Sahoo D, Sharma A, Rashid M, Chandra V, Reddy AG, Torroni A, Foley RA, Thangaraj K, Singh L, Kivisild T, Villems R. Phylogeography of mtDNA haplogroup R7 in the Indian peninsula. BMC Evol Biol 8:227. 2008
Coble 2004 Coble MD, Just RS, O'Callaghan JE, Letmanyi IH, Peterson CT, Irwin JA, Parsons TJ. Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians. Int J Legal Med. 2004 Jun;118(3):137-46.
Corser 2008 NCBI Corser,C.A., McLenachan,P.A., Harrison,A., Pierson,M.J. and Penny,D. Human mitochondrial Q2 haplotypes in the Pacific. NCBI.
Costa 2008 Costa,M.D., Cherni,L., Fernandes,V., Freitas,F., el Gaaied,A.B.A. and Pereira,L. Data from complete mtDNA sequencing of Tunisian centenarians: testing haplogroup association and the 'golden mean' to longevity. NCBI.
Dancause 2009 Dancause KN, Chan CW, Arunotai NH, Lum JK. Origins of the Moken Sea Gypsies inferred from mitochondrial hypervariable region and whole genome sequences. J Hum Genet 54(2):86-93. 2009
D'Aurelio 2009 D'Aurelio,M., Vives-Bauza,C., Davidson,M.M. and Manfredi,G. Mitochondrial DNA background modifies the bioenergetics of NARP/MILS ATP6 mutant cells. Hum. Mol. Genet. (2009) In press
Delgado-Sanchez 2011 Delgado-Sanchez R, Zarate-Moysen A, Monsalvo-Reyes A, Herrero MD, Ruiz-Pesini E, Lopez-Perez M, Montoya J, Montiel-Sosa JF. Mitochondrial encephalomyopathy, lactic acidosis and stroke-like episodes (MELAS) with the A3243G mutation of the tRNALeu(UUR) gene of mtDNA in native American haplogroup B2. Rev Neurol. 2007 Jan 1-15;44(1):18-22.
Derbeneva 2002 Olga A. Derbeneva, Elena B. Starikovskaya, Douglas C. Wallace, Rem I. Sukernik Traces of Early Eurasians in the Mansi of Northwest Siberia Revealed by Mitochondrial DNA Analysis. Am J Hum Genet. 2002 April; 70(4): 1009–1014.
Derbeneva 2002a Olga A. Derbeneva, Rem I. Sukernik, Natalia V. Volodko, Seyed H. Hosseini, Marie T. Lott, Douglas C. Wallace Analysis of Mitochondrial DNA Diversity in the Aleuts of the Commander Islands and Its Implications for the Genetic History of Beringia. Am J Hum Genet. 2002 August; 71(2): 415–421.
Derenko 2007 Derenko M, Malyarchuk B, Grzybowski T, Denisova G, Dambueva I, Perkova M, Dorzhu C, Luzina F, Lee HK, Vanecek T, Villems R, Zakharov I. Phylogeographic analysis of mitochondrial DNA in northern Asian populations. Am J Hum Genet 81(5):1025-1041. 2007
Derenko 2010 Derenko M, Malyarchuk B, Grzybowski T, Denisova G, Rogalla U, Perkova M, Dambueva I, Zakharov I. Origin and post-glacial dispersal of mitochondrial DNA haplogroups C and D in northern Asia. PLoS One 5(12), E15214. 2010
Dubut 2009 Dubut V, Cartault F, Payet C, Thionville M-D, Murail P. Complete mitochondrial sequences for haplogroups M23 and M46: insights into the Asian ancestry of the Malagasy population. Hum Biol 81(4):495-500. 2009
Eaaswarkhanth 2009 Eaaswarkhanth M, Haque I, Ravesh Z, Gallego Romero I, Meganathan PR, Dubey B, Khan FA, Chaubey G, Kivisild T, Tyler-Smith C, Singh L, Thangaraj K. Traces of sub-Saharan and Middle Eastern lineages in Indian Muslim populations. Eur J Hum Genet 18(3):354-363. 2009
Ennafaa 2009 Ennafaa H, Cabrera VM, Abu-Amero KK, Gonzalez AM, Amor MB, Bouhaha R, Dzimiri N, Elgaaied AB, Larruga JM. Mitochondrial DNA haplogroup H structure in North Africa. BMC Genet. 2009 Feb 25;10:8.
Fagundes 2008 Fagundes NJ, Kanitz R, Eckert R, Valls AC, Bogo MR, Salzano FM, Smith DG, Silva WA Jr, Zago MA, Ribeiro-dos-Santos AK, Santos SE, Petzl-Erler ML, Bonatto SL. Mitochondrial population genomics supports a single pre-Clovis origin with a coastal route for the peopling of the Americas. Am J Hum Genet 82(3):583-592. 2008
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Feder 2008 Feder J, Blech I, Ovadia O, Amar S, Wainstein J, Raz I, Dadon S, Arking DE, Glaser B, Mishmar D. Differences in mtDNA haplogroup distribution among 3 Jewish populations alter susceptibility to T2DM complications. BMC Genomics 9:198. 2008
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Garcia 2010 Garcia O, Fregel R, Larruga JM, Alvarez V, Yurrebaso I, Cabrera VM, Gonzalez AM. Using mitochondrial DNA to test the hypothesis of a European post-glacial human recolonization from the Franco-Cantabrian refuge. Heredity. 2011 Jan;106(1):37-45. Epub 2010 Apr 21.
Gasparre 2007 Gasparre,G., Porcelli,A.M., Bonora,E., Pennisi,L.F., Toller,M., Iommarini,L., Ghelli,A., Moretti,M., Betts,C.M., Martinelli,G.N., Ceroni,A.R., Curcio,F., Carelli,V., Rugolo,M., Tallini,G. and Romeo,G. Disruptive mitochondrial DNA mutations in complex I subunits are markers of oncocytic phenotype in thyroid tumors. Proc. Natl. Acad. Sci. U.S.A. 104 (21), 9001-9006. 2007
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Pliss 2005 Pliss L, Tambets K, Loogvali EL, Pronina N, Lazdins M, Krumina A, Baumanis V, Villems R. Mitochondrial DNA portrait of Latvians: towards the understanding of the genetic structure of Baltic-speaking populations. Ann Hum Genet. 2006 Jul;70(Pt 4):439-58.
Quintana-Murci 2004 Quintana-Murci L, Chaix R, Wells RS, Behar DM, Sayar H, Scozzari R, Rengo C, Al-Zahery N, Semino O, Santachiara-Benerecetti AS, Coppa A, Ayub Q, Mohyuddin A, Tyler-Smith C, Qasim Mehdi S, Torroni A, McElreavey K. Where West Meets East: The Complex mtDNA Landscape of the Southwest and Central Asian Corridor. Am J Hum Genet. 2004 May;74(5):827-45. Epub 2004 Apr 7.
Richard 2007 Richard C, Pennarun E, Kivisild T, Tambets K, Tolk HV, Metspalu E, Reidla M, Chevalier S, Giraudet S, Lauc LB, Pericic M, Rudan P, Claustres M, Journel H, Dorval I, Muller C, Villems R, Chaventre A, Moisan JP. An mtDNA perspective of French genetic variation. Ann Hum Biol. 2007 Jan-Feb;34(1):68-79.
Saillard 2000 Saillard J, Forster P, Lynnerup N, Bandelt HJ, Norby S. mtDNA Variation among Greenland Eskimos: The Edge of the Beringian Expansion. Am J Hum Genet. 2000 Sep;67(3):718-26. Epub 2000 Aug 2.
Soares 2009 Soares P, Ermini L, Thomson N, Mormina M, Rito T, Rohl A, Salas A, Oppenheimer S, Macaulay V, Richards MB. Correcting for purifying selection: an improved human mitochondrial molecular clock. Am J Hum Genet 84(6):740-759. 2009
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van Oven 2009 van Oven M, Kayser M. Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Hum Mutat 30(2):E386-E394.
VPereira 2010 Pereira V, Gomes V, Amorim A, Gusmao L, Joao Prata M. Genetic characterization of uniparental lineages in populations from Southwest Iberia with past malaria endemicity. Am J Hum Biol. 2010 Sep-Oct;22(5):588-95.